[0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger [0]PETSC ERROR: or see https://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors [0]PETSC ERROR: configure using --with-debugging=yes, recompile, link, and run [0]PETSC ERROR: to get more information on the crash. [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [0]PETSC ERROR: Signal received [0]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [0]PETSC ERROR: Petsc Release Version 3.13.4, Aug 01, 2020 [0]PETSC ERROR: /home/yim/FreeFem-sources-develop/src/mpi/FreeFem++-mpi on a named f206 by yim Thu Jan 28 18:11:58 2021 [0]PETSC ERROR: Configure options --prefix=/home/yim/FreeFem-install-dev/ff-petsc/r MAKEFLAGS= --with-debugging=0 COPTFLAGS="-O3 -mtune=native" CXXOPTFLAGS="-O3 -mtune=native" FOPTFLAGS="-O3 -mtune=native" --with-cxx-dialect=C++11 --with-ssl=0 --with-x=0 --with-fortran-bindings=0 --with-cudac=0 --with-cc=mpiicc --with-cxx=mpiicpc --with-fc=mpiifort --with-scalar-type=real --with-blaslapack-include=/ssoft/spack/external/intel/2018.4/compilers_and_libraries_2018.5.274/linux/mkl/include --with-blaslapack-lib="-Wl,-rpath,/ssoft/spack/external/intel/2018.4/compilers_and_libraries_2018.5.274/linux/mkl/lib/intel64 -L/ssoft/spack/external/intel/2018.4/compilers_and_libraries_2018.5.274/linux/mkl/lib/intel64 -lmkl_rt -lmkl_sequential -lmkl_core -liomp5 -lpthread" --download-metis --download-ptscotch --download-hypre --download-parmetis --download-superlu --download-suitesparse --download-tetgen --download-slepc --download-hpddm --download-hpddm-commit=ce6ce80 --download-scalapack --download-mumps PETSC_ARCH=fr [0]PETSC ERROR: #1 User provided function() line 0 in unknown file application called MPI_Abort(MPI_COMM_WORLD, 50162059) - process 0 In: PMI_Abort(50162059, application called MPI_Abort(MPI_COMM_WORLD, 50162059) - process 0) [1]PETSC ERROR: ------------------------------------------------------------------------ [1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range [1]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger [1]PETSC ERROR: or see https://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind [1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors [1]PETSC ERROR: configure using --with-debugging=yes, recompile, link, and run [1]PETSC ERROR: to get more information on the crash. [1]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [1]PETSC ERROR: Signal received [1]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [1]PETSC ERROR: Petsc Release Version 3.13.4, Aug 01, 2020 [1]PETSC ERROR: /home/yim/FreeFem-sources-develop/src/mpi/FreeFem++-mpi on a named f206 by yim Thu Jan 28 18:11:58 2021 [1]PETSC ERROR: Configure options --prefix=/home/yim/FreeFem-install-dev/ff-petsc/r MAKEFLAGS= --with-debugging=0 COPTFLAGS="-O3 -mtune=native" CXXOPTFLAGS="-O3 -mtune=native" FOPTFLAGS="-O3 -mtune=native" --with-cxx-dialect=C++11 --with-ssl=0 --with-x=0 --with-fortran-bindings=0 --with-cudac=0 --with-cc=mpiicc --with-cxx=mpiicpc --with-fc=mpiifort --with-scalar-type=real --with-blaslapack-include=/ssoft/spack/external/intel/2018.4/compilers_and_libraries_2018.5.274/linux/mkl/include --with-blaslapack-lib="-Wl,-rpath,/ssoft/spack/external/intel/2018.4/compilers_and_libraries_2018.5.274/linux/mkl/lib/intel64 -L/ssoft/spack/external/intel/2018.4/compilers_and_libraries_2018.5.274/linux/mkl/lib/intel64 -lmkl_rt -lmkl_sequential -lmkl_core -liomp5 -lpthread" --download-metis --download-ptscotch --download-hypre --download-parmetis --download-superlu --download-suitesparse --download-tetgen --download-slepc --download-hpddm --download-hpddm-commit=ce6ce80 --download-scalapack --download-mumps PETSC_ARCH=fr [1]PETSC ERROR: #1 User provided function() line 0 in unknown file application called MPI_Abort(MPI_COMM_WORLD, 50162059) - process 1 In: PMI_Abort(50162059, application called MPI_Abort(MPI_COMM_WORLD, 50162059) - process 1) srun: Job step aborted: Waiting up to 32 seconds for job step to finish. slurmstepd: error: *** STEP 6954404.0 ON f206 CANCELLED AT 2021-01-28T18:11:59 *** srun: error: f206: tasks 0-1: Exited with exit code 15 srun: Terminating job step 6954404.0