This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by FreeFEM configure 4.9, which was generated by GNU Autoconf 2.71. Invocation command line was $ ./configure --enable-download --enable-optim --prefix=/home2/barretk3 MPIRUN=mpiexec ## --------- ## ## Platform. ## ## --------- ## hostname = vegaln1 uname -m = x86_64 uname -r = 3.10.0-693.11.6.el7.x86_64 uname -s = Linux uname -v = #1 SMP Thu Jan 4 01:06:37 UTC 2018 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /cm/local/apps/cmake/3.9.6/bin/ PATH: /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/bin/ PATH: /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/bin/ PATH: /cm/shared/apps/intel/itac/2019.5.075/intel64/bin/ PATH: /cm/shared/apps/hdf5/1.10.0/bin/ PATH: /usr/local/bin/ PATH: /usr/bin/ PATH: /usr/local/sbin/ PATH: /usr/sbin/ PATH: /opt/ibutils/bin/ PATH: /sbin/ PATH: /cm/local/apps/environment-modules/3.2.10/bin/ PATH: ./ PATH: /home2/barretk3/.local/bin/ PATH: /home2/barretk3/bin/ ## ----------- ## ## Core tests. ## ## ----------- ## configure:3758: looking for aux files: config.guess config.sub compile missing install-sh configure:3771: trying ./ configure:3800: ./config.guess found configure:3800: ./config.sub found configure:3800: ./compile found configure:3800: ./missing found configure:3782: ./install-sh found configure:3944: checking for a BSD-compatible install configure:4017: result: /usr/bin/install -c configure:4028: checking whether build environment is sane configure:4083: result: yes configure:4242: checking for a race-free mkdir -p configure:4286: result: /usr/bin/mkdir -p configure:4293: checking for gawk configure:4314: found /usr/bin/gawk configure:4325: result: gawk configure:4336: checking whether make sets $(MAKE) configure:4359: result: yes configure:4389: checking whether make supports nested variables configure:4407: result: yes configure:4539: checking whether make sets $(MAKE) configure:4562: result: yes configure:4619: checking for ranlib configure:4640: found /usr/bin/ranlib configure:4651: result: ranlib configure:4692: checking whether to enable maintainer-specific portions of Makefiles configure:4702: result: no configure:4782: checking for gcc configure:4803: found /usr/bin/gcc configure:4814: result: gcc configure:5167: checking for C compiler version configure:5176: gcc --version >&5 gcc (GCC) 4.8.5 20150623 (Red Hat 4.8.5-16) Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:5187: $? = 0 configure:5176: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-16) (GCC) configure:5187: $? = 0 configure:5176: gcc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:5187: $? = 4 configure:5176: gcc -qversion >&5 gcc: error: unrecognized command line option '-qversion' gcc: fatal error: no input files compilation terminated. configure:5187: $? = 4 configure:5176: gcc -version >&5 gcc: error: unrecognized command line option '-version' gcc: fatal error: no input files compilation terminated. configure:5187: $? = 4 configure:5207: checking whether the C compiler works configure:5229: gcc conftest.c >&5 configure:5233: $? = 0 configure:5283: result: yes configure:5286: checking for C compiler default output file name configure:5288: result: a.out configure:5294: checking for suffix of executables configure:5301: gcc -o conftest conftest.c >&5 configure:5305: $? = 0 configure:5328: result: configure:5350: checking whether we are cross compiling configure:5358: gcc -o conftest conftest.c >&5 configure:5362: $? = 0 configure:5369: ./conftest configure:5373: $? = 0 configure:5388: result: no configure:5393: checking for suffix of object files configure:5416: gcc -c conftest.c >&5 configure:5420: $? = 0 configure:5442: result: o configure:5446: checking whether the compiler supports GNU C configure:5466: gcc -c conftest.c >&5 configure:5466: $? = 0 configure:5476: result: yes configure:5487: checking whether gcc accepts -g configure:5508: gcc -c -g conftest.c >&5 configure:5508: $? = 0 configure:5552: result: yes configure:5572: checking for gcc option to enable C11 features configure:5587: gcc -c -g -O2 conftest.c >&5 conftest.c:63:3: error: #error "Compiler does not advertise C99 conformance" # error "Compiler does not advertise C99 conformance" ^ conftest.c:118:29: error: expected ';', ',' or ')' before 'text' test_restrict (ccp restrict text) ^ conftest.c:167:3: error: #error "Compiler does not advertise C11 conformance" # error "Compiler does not advertise C11 conformance" ^ conftest.c:198:12: error: 'syntax' undeclared here (not in a function) #define u8 syntax error! ^ conftest.c:199:29: note: in expansion of macro 'u8' char const utf8_literal[] = u8"happens to be ASCII" "another string"; ^ conftest.c:198:19: error: expected ',' or ';' before 'error' #define u8 syntax error! ^ conftest.c:199:29: note: in expansion of macro 'u8' char const utf8_literal[] = u8"happens to be ASCII" "another string"; ^ conftest.c: In function 'main': conftest.c:232:18: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'newvar' char *restrict newvar = "Another string"; ^ conftest.c:232:18: error: 'newvar' undeclared (first use in this function) conftest.c:232:18: note: each undeclared identifier is reported only once for each function it appears in conftest.c:242:3: error: 'for' loop initial declarations are only allowed in C99 mode for (int i = 0; i < ia->datasize; ++i) ^ conftest.c:242:3: note: use option -std=c99 or -std=gnu99 to compile your code configure:5587: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | /* end confdefs.h. */ | | /* Does the compiler advertise C89 conformance? | Do not test the value of __STDC__, because some compilers set it to 0 | while being otherwise adequately conformant. */ | #if !defined __STDC__ | # error "Compiler does not advertise C89 conformance" | #endif | | #include | #include | struct stat; | /* Most of the following tests are stolen from RCS 5.7 src/conf.sh. */ | struct buf { int x; }; | struct buf * (*rcsopen) (struct buf *, struct stat *, int); | static char *e (p, i) | char **p; | int i; | { | return p[i]; | } | static char *f (char * (*g) (char **, int), char **p, ...) | { | char *s; | va_list v; | va_start (v,p); | s = g (p, va_arg (v,int)); | va_end (v); | return s; | } | | /* OSF 4.0 Compaq cc is some sort of almost-ANSI by default. It has | function prototypes and stuff, but not \xHH hex character constants. | These do not provoke an error unfortunately, instead are silently treated | as an "x". The following induces an error, until -std is added to get | proper ANSI mode. Curiously \x00 != x always comes out true, for an | array size at least. It is necessary to write \x00 == 0 to get something | that is true only with -std. */ | int osf4_cc_array ['\x00' == 0 ? 1 : -1]; | | /* IBM C 6 for AIX is almost-ANSI by default, but it replaces macro parameters | inside strings and character constants. */ | #define FOO(x) 'x' | int xlc6_cc_array[FOO(a) == 'x' ? 1 : -1]; | | int test (int i, double x); | struct s1 {int (*f) (int a);}; | struct s2 {int (*f) (double a);}; | int pairnames (int, char **, int *(*)(struct buf *, struct stat *, int), | int, int); | | // Does the compiler advertise C99 conformance? | #if !defined __STDC_VERSION__ || __STDC_VERSION__ < 199901L | # error "Compiler does not advertise C99 conformance" | #endif | | #include | extern int puts (const char *); | extern int printf (const char *, ...); | extern int dprintf (int, const char *, ...); | extern void *malloc (size_t); | | // Check varargs macros. These examples are taken from C99 6.10.3.5. | // dprintf is used instead of fprintf to avoid needing to declare | // FILE and stderr. | #define debug(...) dprintf (2, __VA_ARGS__) | #define showlist(...) puts (#__VA_ARGS__) | #define report(test,...) ((test) ? puts (#test) : printf (__VA_ARGS__)) | static void | test_varargs_macros (void) | { | int x = 1234; | int y = 5678; | debug ("Flag"); | debug ("X = %d\n", x); | showlist (The first, second, and third items.); | report (x>y, "x is %d but y is %d", x, y); | } | | // Check long long types. | #define BIG64 18446744073709551615ull | #define BIG32 4294967295ul | #define BIG_OK (BIG64 / BIG32 == 4294967297ull && BIG64 % BIG32 == 0) | #if !BIG_OK | #error "your preprocessor is broken" | #endif | #if BIG_OK | #else | #error "your preprocessor is broken" | #endif | static long long int bignum = -9223372036854775807LL; | static unsigned long long int ubignum = BIG64; | | struct incomplete_array | { | int datasize; | double data[]; | }; | | struct named_init { | int number; | const wchar_t *name; | double average; | }; | | typedef const char *ccp; | | static inline int | test_restrict (ccp restrict text) | { | // See if C++-style comments work. | // Iterate through items via the restricted pointer. | // Also check for declarations in for loops. | for (unsigned int i = 0; *(text+i) != '\0'; ++i) | continue; | return 0; | } | | // Check varargs and va_copy. | static bool | test_varargs (const char *format, ...) | { | va_list args; | va_start (args, format); | va_list args_copy; | va_copy (args_copy, args); | | const char *str = ""; | int number = 0; | float fnumber = 0; | | while (*format) | { | switch (*format++) | { | case 's': // string | str = va_arg (args_copy, const char *); | break; | case 'd': // int | number = va_arg (args_copy, int); | break; | case 'f': // float | fnumber = va_arg (args_copy, double); | break; | default: | break; | } | } | va_end (args_copy); | va_end (args); | | return *str && number && fnumber; | } | | | // Does the compiler advertise C11 conformance? | #if !defined __STDC_VERSION__ || __STDC_VERSION__ < 201112L | # error "Compiler does not advertise C11 conformance" | #endif | | // Check _Alignas. | char _Alignas (double) aligned_as_double; | char _Alignas (0) no_special_alignment; | extern char aligned_as_int; | char _Alignas (0) _Alignas (int) aligned_as_int; | | // Check _Alignof. | enum | { | int_alignment = _Alignof (int), | int_array_alignment = _Alignof (int[100]), | char_alignment = _Alignof (char) | }; | _Static_assert (0 < -_Alignof (int), "_Alignof is signed"); | | // Check _Noreturn. | int _Noreturn does_not_return (void) { for (;;) continue; } | | // Check _Static_assert. | struct test_static_assert | { | int x; | _Static_assert (sizeof (int) <= sizeof (long int), | "_Static_assert does not work in struct"); | long int y; | }; | | // Check UTF-8 literals. | #define u8 syntax error! | char const utf8_literal[] = u8"happens to be ASCII" "another string"; | | // Check duplicate typedefs. | typedef long *long_ptr; | typedef long int *long_ptr; | typedef long_ptr long_ptr; | | // Anonymous structures and unions -- taken from C11 6.7.2.1 Example 1. | struct anonymous | { | union { | struct { int i; int j; }; | struct { int k; long int l; } w; | }; | int m; | } v1; | | | int | main (int argc, char **argv) | { | int ok = 0; | | ok |= (argc == 0 || f (e, argv, 0) != argv[0] || f (e, argv, 1) != argv[1]); | | | // Check bool. | _Bool success = false; | success |= (argc != 0); | | // Check restrict. | if (test_restrict ("String literal") == 0) | success = true; | char *restrict newvar = "Another string"; | | // Check varargs. | success &= test_varargs ("s, d' f .", "string", 65, 34.234); | test_varargs_macros (); | | // Check flexible array members. | struct incomplete_array *ia = | malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10)); | ia->datasize = 10; | for (int i = 0; i < ia->datasize; ++i) | ia->data[i] = i * 1.234; | | // Check named initializers. | struct named_init ni = { | .number = 34, | .name = L"Test wide string", | .average = 543.34343, | }; | | ni.number = 58; | | int dynamic_array[ni.number]; | dynamic_array[0] = argv[0][0]; | dynamic_array[ni.number - 1] = 543; | | // work around unused variable warnings | ok |= (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x' | || dynamic_array[ni.number - 1] != 543); | | | _Static_assert ((offsetof (struct anonymous, i) | == offsetof (struct anonymous, w.k)), | "Anonymous union alignment botch"); | v1.i = 2; | v1.w.k = 5; | ok |= v1.i != 5; | | return ok; | } | configure:5587: gcc -std=gnu11 -c -g -O2 conftest.c >&5 configure:5587: $? = 0 configure:5608: result: -std=gnu11 configure:5721: checking whether gcc -std=gnu11 understands -c and -o together configure:5744: gcc -std=gnu11 -c conftest.c -o conftest2.o configure:5747: $? = 0 configure:5744: gcc -std=gnu11 -c conftest.c -o conftest2.o configure:5747: $? = 0 configure:5759: result: yes configure:5779: checking whether make supports the include directive configure:5794: make -f confmf.GNU && cat confinc.out this is the am__doit target configure:5797: $? = 0 configure:5816: result: yes (GNU style) configure:5842: checking dependency style of gcc -std=gnu11 configure:5954: result: gcc3 configure:6038: checking for g++ configure:6059: found /usr/bin/g++ configure:6070: result: g++ configure:6097: checking for C++ compiler version configure:6106: g++ --version >&5 g++ (GCC) 4.8.5 20150623 (Red Hat 4.8.5-16) Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:6117: $? = 0 configure:6106: g++ -v >&5 Using built-in specs. COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-16) (GCC) configure:6117: $? = 0 configure:6106: g++ -V >&5 g++: error: unrecognized command line option '-V' g++: fatal error: no input files compilation terminated. configure:6117: $? = 4 configure:6106: g++ -qversion >&5 g++: error: unrecognized command line option '-qversion' g++: fatal error: no input files compilation terminated. configure:6117: $? = 4 configure:6121: checking whether the compiler supports GNU C++ configure:6141: g++ -c conftest.cpp >&5 configure:6141: $? = 0 configure:6151: result: yes configure:6162: checking whether g++ accepts -g configure:6183: g++ -c -g conftest.cpp >&5 configure:6183: $? = 0 configure:6227: result: yes configure:6247: checking for g++ option to enable C++11 features configure:6262: g++ -c -g -O2 conftest.cpp >&5 conftest.cpp:57:3: error: #error "Compiler does not advertise C++11 conformance" # error "Compiler does not advertise C++11 conformance" ^ conftest.cpp:62:3: error: 'constexpr' does not name a type constexpr int get_val() { return 20; } ^ conftest.cpp:62:3: note: C++11 'constexpr' only available with -std=c++11 or -std=gnu++11 conftest.cpp: In constructor 'cxx11test::delegate::delegate()': conftest.cpp:74:30: warning: delegating constructors only available with -std=c++11 or -std=gnu++11 [enabled by default] delegate(): delegate(2354) {} ^ conftest.cpp: At global scope: conftest.cpp:85:24: warning: override controls (override/final) only available with -std=c++11 or -std=gnu++11 [enabled by default] virtual int getval() override final { return this->n * 2; } ^ conftest.cpp:85:26: warning: override controls (override/final) only available with -std=c++11 or -std=gnu++11 [enabled by default] virtual int getval() override final { return this->n * 2; } ^ conftest.cpp:92:16: warning: defaulted and deleted functions only available with -std=c++11 or -std=gnu++11 [enabled by default] nocopy() = default; ^ conftest.cpp:93:29: warning: defaulted and deleted functions only available with -std=c++11 or -std=gnu++11 [enabled by default] nocopy(const nocopy&) = delete; ^ conftest.cpp:94:41: warning: defaulted and deleted functions only available with -std=c++11 or -std=gnu++11 [enabled by default] nocopy & operator=(const nocopy&) = delete; ^ conftest.cpp:106:46: error: ISO C++ forbids declaration of 'sum' with no type [-fpermissive] template auto sum(V first) -> V ^ conftest.cpp:106:46: error: top-level declaration of 'sum' specifies 'auto' conftest.cpp:106:46: error: trailing return type only available with -std=c++11 or -std=gnu++11 conftest.cpp:110:33: warning: variadic templates only available with -std=c++11 or -std=gnu++11 [enabled by default] template auto sum(V first, Args... rest) -> V ^ conftest.cpp:110:69: warning: variadic templates only available with -std=c++11 or -std=gnu++11 [enabled by default] template auto sum(V first, Args... rest) -> V ^ conftest.cpp:110:78: error: ISO C++ forbids declaration of 'sum' with no type [-fpermissive] template auto sum(V first, Args... rest) -> V ^ conftest.cpp:110:78: error: top-level declaration of 'sum' specifies 'auto' conftest.cpp:110:78: error: trailing return type only available with -std=c++11 or -std=gnu++11 conftest.cpp: In function 'int main(int, char**)': conftest.cpp:134:8: error: 'a1' does not name a type auto a1 = 6538; ^ conftest.cpp:135:8: error: 'a2' does not name a type auto a2 = 48573953.4; ^ conftest.cpp:136:8: error: 'a3' does not name a type auto a3 = "String literal"; ^ conftest.cpp:139:13: error: 'i' does not name a type for (auto i = a3; *i; ++i) { total += *i; } ^ conftest.cpp:139:21: error: expected ';' before '*' token for (auto i = a3; *i; ++i) { total += *i; } ^ conftest.cpp:139:22: error: 'i' was not declared in this scope for (auto i = a3; *i; ++i) { total += *i; } ^ conftest.cpp:141:12: error: 'a2' was not declared in this scope decltype(a2) a4 = 34895.034; ^ conftest.cpp:141:14: error: 'decltype' was not declared in this scope decltype(a2) a4 = 34895.034; ^ conftest.cpp:141:16: error: expected ';' before 'a4' decltype(a2) a4 = 34895.034; ^ conftest.cpp:145:12: error: 'get_val' is not a member of 'cxx11test' short sa[cxx11test::get_val()] = { 0 }; ^ conftest.cpp:155:14: error: ISO C++ forbids declaration of 'x' with no type [-fpermissive] for (auto &x : array) { x += 23; } ^ conftest.cpp:155:18: error: range-based 'for' loops are not allowed in C++98 mode for (auto &x : array) { x += 23; } ^ conftest.cpp:160:41: warning: lambda expressions only available with -std=c++11 or -std=gnu++11 [enabled by default] assert (eval ([](int x) { return x*2; }, 21) == 42); ^ conftest.cpp:160:46: error: no matching function for call to 'eval(main(int, char**)::__lambda0, int)' assert (eval ([](int x) { return x*2; }, 21) == 42); ^ conftest.cpp:160:46: note: candidate is: conftest.cpp:100:44: note: template Ret cxx11test::eval(Fn, Ret) template Ret eval(Fn f, Ret v) ^ conftest.cpp:100:44: note: template argument deduction/substitution failed: conftest.cpp: In substitution of 'template Ret cxx11test::eval(Fn, Ret) [with Ret = int; Fn = main(int, char**)::__lambda0]': conftest.cpp:160:46: required from here conftest.cpp:160:46: error: template argument for 'template Ret cxx11test::eval(Fn, Ret)' uses local type 'main(int, char**)::__lambda0' assert (eval ([](int x) { return x*2; }, 21) == 42); ^ conftest.cpp:160:46: error: trying to instantiate 'template Ret cxx11test::eval(Fn, Ret)' conftest.cpp:162:48: warning: lambda expressions only available with -std=c++11 or -std=gnu++11 [enabled by default] assert (eval ([&](double x) { return d += x; }, 3.0) == 5.0); ^ conftest.cpp:162:54: error: no matching function for call to 'eval(main(int, char**)::__lambda1, double)' assert (eval ([&](double x) { return d += x; }, 3.0) == 5.0); ^ conftest.cpp:162:54: note: candidate is: conftest.cpp:100:44: note: template Ret cxx11test::eval(Fn, Ret) template Ret eval(Fn f, Ret v) ^ conftest.cpp:100:44: note: template argument deduction/substitution failed: conftest.cpp: In substitution of 'template Ret cxx11test::eval(Fn, Ret) [with Ret = double; Fn = main(int, char**)::__lambda1]': conftest.cpp:162:54: required from here conftest.cpp:162:54: error: template argument for 'template Ret cxx11test::eval(Fn, Ret)' uses local type 'main(int, char**)::__lambda1' assert (eval ([&](double x) { return d += x; }, 3.0) == 5.0); ^ conftest.cpp:162:54: error: trying to instantiate 'template Ret cxx11test::eval(Fn, Ret)' conftest.cpp:164:56: warning: lambda expressions only available with -std=c++11 or -std=gnu++11 [enabled by default] assert (eval ([=](double x) mutable { return d += x; }, 4.0) == 9.0); ^ conftest.cpp:164:62: error: no matching function for call to 'eval(main(int, char**)::__lambda2, double)' assert (eval ([=](double x) mutable { return d += x; }, 4.0) == 9.0); ^ conftest.cpp:164:62: note: candidate is: conftest.cpp:100:44: note: template Ret cxx11test::eval(Fn, Ret) template Ret eval(Fn f, Ret v) ^ conftest.cpp:100:44: note: template argument deduction/substitution failed: conftest.cpp: In substitution of 'template Ret cxx11test::eval(Fn, Ret) [with Ret = double; Fn = main(int, char**)::__lambda2]': conftest.cpp:164:62: required from here conftest.cpp:164:62: error: template argument for 'template Ret cxx11test::eval(Fn, Ret)' uses local type 'main(int, char**)::__lambda2' assert (eval ([=](double x) mutable { return d += x; }, 4.0) == 9.0); ^ conftest.cpp:164:62: error: trying to instantiate 'template Ret cxx11test::eval(Fn, Ret)' conftest.cpp:169:20: error: 'cxx11test::sum' has not been declared using cxx11test::sum; ^ conftest.cpp:170:8: error: 'a' does not name a type auto a = sum(1); ^ conftest.cpp:171:8: error: 'b' does not name a type auto b = sum(1, 2); ^ conftest.cpp:172:8: error: 'c' does not name a type auto c = sum(1.0, 2.0, 3.0); ^ conftest.cpp:186:13: error: 'nullptr' was not declared in this scope char *c = nullptr; ^ conftest.cpp:190:36: error: '>>' should be '> >' within a nested template argument list test_template<::test_template> v(test_template(12)); ^ conftest.cpp:190:16: error: '<::' cannot begin a template-argument list [-fpermissive] test_template<::test_template> v(test_template(12)); ^ conftest.cpp:190:16: note: '<:' is an alternate spelling for '['. Insert whitespace between '<' and '::' conftest.cpp:190:16: note: (if you use '-fpermissive' or '-std=c++11', or '-std=gnu++11' G++ will accept your code) conftest.cpp:194:22: error: 'u8' was not declared in this scope char const *utf8 = u8"UTF-8 string \u2500"; ^ conftest.cpp:195:3: error: 'char16_t' was not declared in this scope char16_t const *utf16 = u"UTF-8 string \u2500"; ^ conftest.cpp:195:12: error: expected ';' before 'const' char16_t const *utf16 = u"UTF-8 string \u2500"; ^ conftest.cpp:196:3: error: 'char32_t' was not declared in this scope char32_t const *utf32 = U"UTF-32 string \u2500"; ^ conftest.cpp:196:12: error: expected ';' before 'const' char32_t const *utf32 = U"UTF-32 string \u2500"; ^ configure:6262: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | /* end confdefs.h. */ | | // Does the compiler advertise C++98 conformance? | #if !defined __cplusplus || __cplusplus < 199711L | # error "Compiler does not advertise C++98 conformance" | #endif | | // These inclusions are to reject old compilers that | // lack the unsuffixed header files. | #include | #include | | // and are *not* freestanding headers in C++98. | extern void assert (int); | namespace std { | extern int strcmp (const char *, const char *); | } | | // Namespaces, exceptions, and templates were all added after "C++ 2.0". | using std::exception; | using std::strcmp; | | namespace { | | void test_exception_syntax() | { | try { | throw "test"; | } catch (const char *s) { | // Extra parentheses suppress a warning when building autoconf itself, | // due to lint rules shared with more typical C programs. | assert (!(strcmp) (s, "test")); | } | } | | template struct test_template | { | T const val; | explicit test_template(T t) : val(t) {} | template T add(U u) { return static_cast(u) + val; } | }; | | } // anonymous namespace | | | // Does the compiler advertise C++ 2011 conformance? | #if !defined __cplusplus || __cplusplus < 201103L | # error "Compiler does not advertise C++11 conformance" | #endif | | namespace cxx11test | { | constexpr int get_val() { return 20; } | | struct testinit | { | int i; | double d; | }; | | class delegate | { | public: | delegate(int n) : n(n) {} | delegate(): delegate(2354) {} | | virtual int getval() { return this->n; }; | protected: | int n; | }; | | class overridden : public delegate | { | public: | overridden(int n): delegate(n) {} | virtual int getval() override final { return this->n * 2; } | }; | | class nocopy | { | public: | nocopy(int i): i(i) {} | nocopy() = default; | nocopy(const nocopy&) = delete; | nocopy & operator=(const nocopy&) = delete; | private: | int i; | }; | | // for testing lambda expressions | template Ret eval(Fn f, Ret v) | { | return f(v); | } | | // for testing variadic templates and trailing return types | template auto sum(V first) -> V | { | return first; | } | template auto sum(V first, Args... rest) -> V | { | return first + sum(rest...); | } | } | | | int | main (int argc, char **argv) | { | int ok = 0; | | assert (argc); | assert (! argv[0]); | { | test_exception_syntax (); | test_template tt (2.0); | assert (tt.add (4) == 6.0); | assert (true && !false); | } | | | { | // Test auto and decltype | auto a1 = 6538; | auto a2 = 48573953.4; | auto a3 = "String literal"; | | int total = 0; | for (auto i = a3; *i; ++i) { total += *i; } | | decltype(a2) a4 = 34895.034; | } | { | // Test constexpr | short sa[cxx11test::get_val()] = { 0 }; | } | { | // Test initializer lists | cxx11test::testinit il = { 4323, 435234.23544 }; | } | { | // Test range-based for | int array[] = {9, 7, 13, 15, 4, 18, 12, 10, 5, 3, | 14, 19, 17, 8, 6, 20, 16, 2, 11, 1}; | for (auto &x : array) { x += 23; } | } | { | // Test lambda expressions | using cxx11test::eval; | assert (eval ([](int x) { return x*2; }, 21) == 42); | double d = 2.0; | assert (eval ([&](double x) { return d += x; }, 3.0) == 5.0); | assert (d == 5.0); | assert (eval ([=](double x) mutable { return d += x; }, 4.0) == 9.0); | assert (d == 5.0); | } | { | // Test use of variadic templates | using cxx11test::sum; | auto a = sum(1); | auto b = sum(1, 2); | auto c = sum(1.0, 2.0, 3.0); | } | { | // Test constructor delegation | cxx11test::delegate d1; | cxx11test::delegate d2(); | cxx11test::delegate d3(45); | } | { | // Test override and final | cxx11test::overridden o1(55464); | } | { | // Test nullptr | char *c = nullptr; | } | { | // Test template brackets | test_template<::test_template> v(test_template(12)); | } | { | // Unicode literals | char const *utf8 = u8"UTF-8 string \u2500"; | char16_t const *utf16 = u"UTF-8 string \u2500"; | char32_t const *utf32 = U"UTF-32 string \u2500"; | } | | return ok; | } | configure:6280: result: none needed configure:6346: checking dependency style of g++ configure:6458: result: gcc3 configure:6506: checking for unzip configure:6527: found /usr/bin/unzip configure:6539: result: yes configure:6549: checking for m4 configure:6570: found /usr/bin/m4 configure:6582: result: yes configure:6592: checking for bison configure:6613: found /usr/bin/bison configure:6625: result: yes configure:6635: checking for flex configure:6656: found /usr/bin/flex configure:6668: result: yes configure:6678: checking for cmake configure:6699: found /cm/local/apps/cmake/3.9.6/bin/cmake configure:6711: result: yes configure:6721: checking for patch configure:6742: found /usr/bin/patch configure:6754: result: yes configure:6787: g++ -o conftest -g -O2 conftest.cpp >&5 configure:6787: $? = 0 configure:6787: ./conftest configure:6787: $? = 0 configure:6792: g++ -o conftest -g -O2 conftest.cpp >&5 configure:6792: $? = 0 configure:6792: ./conftest configure:6792: $? = 0 configure:6797: g++ -o conftest -g -O2 conftest.cpp >&5 configure:6797: $? = 0 configure:6797: ./conftest configure:6797: $? = 0 configure:6924: checking for gfortran configure:6945: found /usr/bin/gfortran configure:6956: result: gfortran configure:6982: checking for Fortran compiler version configure:6991: gfortran --version >&5 GNU Fortran (GCC) 4.8.5 20150623 (Red Hat 4.8.5-16) Copyright (C) 2015 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:7002: $? = 0 configure:6991: gfortran -v >&5 Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-16) (GCC) configure:7002: $? = 0 configure:6991: gfortran -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:7002: $? = 4 configure:6991: gfortran -qversion >&5 gfortran: error: unrecognized command line option '-qversion' gfortran: fatal error: no input files compilation terminated. configure:7002: $? = 4 configure:7011: checking whether the compiler supports GNU Fortran configure:7025: gfortran -c conftest.F >&5 configure:7025: $? = 0 configure:7035: result: yes configure:7043: checking whether gfortran accepts -g configure:7055: gfortran -c -g conftest.f >&5 configure:7055: $? = 0 configure:7064: result: yes configure:7151: checking for gfortran configure:7172: found /usr/bin/gfortran configure:7183: result: gfortran configure:7209: checking for Fortran 77 compiler version configure:7218: gfortran --version >&5 GNU Fortran (GCC) 4.8.5 20150623 (Red Hat 4.8.5-16) Copyright (C) 2015 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:7229: $? = 0 configure:7218: gfortran -v >&5 Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-16) (GCC) configure:7229: $? = 0 configure:7218: gfortran -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:7229: $? = 4 configure:7218: gfortran -qversion >&5 gfortran: error: unrecognized command line option '-qversion' gfortran: fatal error: no input files compilation terminated. configure:7229: $? = 4 configure:7238: checking whether the compiler supports GNU Fortran 77 configure:7252: gfortran -c conftest.F >&5 configure:7252: $? = 0 configure:7262: result: yes configure:7270: checking whether gfortran accepts -g configure:7282: gfortran -c -g conftest.f >&5 configure:7282: $? = 0 configure:7291: result: yes configure:7331: checking build system type configure:7346: result: x86_64-pc-linux-gnu configure:7366: checking host system type configure:7380: result: x86_64-pc-linux-gnu configure:7405: checking how to get verbose linking output from gfortran configure:7416: gfortran -c -g -O2 conftest.f >&5 configure:7416: $? = 0 configure:7435: gfortran -o conftest -g -O2 -v conftest.f Using built-in specs. Target: x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-16) (GCC) /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-redhat-linux/4.8.5/finclude -o /tmp/ccI7utyc.s GNU Fortran (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-16) (x86_64-redhat-linux) compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-16), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-16) (x86_64-redhat-linux) compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-16), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --64 -o /tmp/cczCtOqE.o /tmp/ccI7utyc.s GNU assembler version 2.25.1 (x86_64-redhat-linux) using BFD version version 2.25.1-32.base.el7_4.1 Reading specs from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/libgfortran.spec rename spec lib to liborig /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/collect2 --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. /tmp/cczCtOqE.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o configure:7518: result: -v configure:7520: checking for Fortran 77 libraries of gfortran configure:7544: gfortran -o conftest -g -O2 -v conftest.f Using built-in specs. Target: x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-16) (GCC) /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-redhat-linux/4.8.5/finclude -o /tmp/cccHrbfj.s GNU Fortran (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-16) (x86_64-redhat-linux) compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-16), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran (GCC) version 4.8.5 20150623 (Red Hat 4.8.5-16) (x86_64-redhat-linux) compiled by GNU C version 4.8.5 20150623 (Red Hat 4.8.5-16), GMP version 6.0.0, MPFR version 3.1.1, MPC version 1.0.1 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --64 -o /tmp/cc1aQooL.o /tmp/cccHrbfj.s GNU assembler version 2.25.1 (x86_64-redhat-linux) using BFD version version 2.25.1-32.base.el7_4.1 Reading specs from /usr/lib/gcc/x86_64-redhat-linux/4.8.5/libgfortran.spec rename spec lib to liborig /usr/libexec/gcc/x86_64-redhat-linux/4.8.5/collect2 --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtbegin.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. /tmp/cc1aQooL.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.8.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/crtn.o configure:7760: result: -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath configure:7892: g++ -o conftest -g -O2 conftest.cpp -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:7892: $? = 0 configure:7910: checking Size of fortran 77 integer configure:7935: gfortran -o conftest -g -O2 conftest.f >&5 configure:7935: $? = 0 configure:7935: ./conftest configure:7935: $? = 0 configure:7952: result: 4 configure:7960: checking for dummy main to link with Fortran 77 libraries configure:7995: gcc -std=gnu11 -o conftest -g -O2 conftest.c -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:7995: $? = 0 configure:8042: result: none configure:8074: checking for Fortran 77 name-mangling scheme configure:8088: gfortran -c -g -O2 conftest.f >&5 configure:8088: $? = 0 configure:8127: gcc -std=gnu11 -o conftest -g -O2 conftest.c cfortran_test.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 /tmp/ccK7EV0d.o: In function `main': /home2/barretk3/FreeFem-sources/conftest.c:27: undefined reference to `foobar' collect2: error: ld returned 1 exit status configure:8127: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char foobar (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return foobar (); | ; | return 0; | } configure:8127: gcc -std=gnu11 -o conftest -g -O2 conftest.c cfortran_test.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:8127: $? = 0 configure:8183: gcc -std=gnu11 -o conftest -g -O2 conftest.c cfortran_test.o -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:8183: $? = 0 configure:8226: result: lower case, underscore, no extra underscore configure:8321: ++ add f77 : -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath ; -DAdd_ in plugin/seq/WHERE_LIBRARY-config " configure:8335: ++ add fc : -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath ; -DAdd_ in plugin/seq/WHERE_LIBRARY-config " configure:8408: checking for gcc configure:8440: result: gcc configure:8793: checking for C compiler version configure:8802: gcc --version >&5 gcc (GCC) 4.8.5 20150623 (Red Hat 4.8.5-16) Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:8813: $? = 0 configure:8802: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-16) (GCC) configure:8813: $? = 0 configure:8802: gcc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:8813: $? = 4 configure:8802: gcc -qversion >&5 gcc: error: unrecognized command line option '-qversion' gcc: fatal error: no input files compilation terminated. configure:8813: $? = 4 configure:8802: gcc -version >&5 gcc: error: unrecognized command line option '-version' gcc: fatal error: no input files compilation terminated. configure:8813: $? = 4 configure:8817: checking whether the compiler supports GNU C configure:8855: result: yes configure:8866: checking whether gcc accepts -g configure:8955: result: yes configure:8975: checking for gcc option to enable C11 features configure:9011: result: -std=gnu11 configure:9124: checking whether gcc -std=gnu11 understands -c and -o together configure:9170: result: yes configure:9189: checking dependency style of gcc -std=gnu11 configure:9301: result: gcc3 configure:9331: checking for flex configure:9352: found /usr/bin/flex configure:9363: result: flex configure:9412: checking for lex output file root configure:9425: flex conftest.l configure:9429: $? = 0 configure:9437: result: lex.yy configure:9452: checking for lex library configure:9477: g++ -o conftest -g -O2 conftest.cpp >&5 configure:9477: $? = 0 configure:9490: result: none needed configure:9505: checking for library containing yywrap configure:9542: g++ -o conftest -g -O2 conftest.cpp >&5 /tmp/ccmwfGsM.o: In function `main': /home2/barretk3/FreeFem-sources/conftest.cpp:28: undefined reference to `yywrap' collect2: error: ld returned 1 exit status configure:9542: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | /* end confdefs.h. */ | | namespace conftest { | extern "C" int yywrap (); | } | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return conftest::yywrap (); | ; | return 0; | } configure:9542: g++ -o conftest -g -O2 conftest.cpp -lfl >&5 /usr/bin/ld: cannot find -lfl collect2: error: ld returned 1 exit status configure:9542: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | /* end confdefs.h. */ | | namespace conftest { | extern "C" int yywrap (); | } | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return conftest::yywrap (); | ; | return 0; | } configure:9542: g++ -o conftest -g -O2 conftest.cpp -ll >&5 /usr/bin/ld: cannot find -ll collect2: error: ld returned 1 exit status configure:9542: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | /* end confdefs.h. */ | | namespace conftest { | extern "C" int yywrap (); | } | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return conftest::yywrap (); | ; | return 0; | } configure:9562: result: no configure:9578: checking whether yytext is a pointer configure:9594: g++ -c -g -O2 conftest.cpp >&5 configure:9594: $? = 0 configure:9601: result: yes configure:9620: checking for bison configure:9641: found /usr/bin/bison configure:9652: result: bison -y configure:9674: checking for pthread_create in -lpthread configure:9704: g++ -o conftest -g -O2 conftest.cpp -lpthread >&5 configure:9704: $? = 0 configure:9714: result: yes configure:9723: checking for omp_get_wtime in -liomp5 configure:9753: g++ -o conftest -g -O2 conftest.cpp -liomp5 >&5 /usr/bin/ld: cannot find -liomp5 collect2: error: ld returned 1 exit status configure:9753: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | /* end confdefs.h. */ | | namespace conftest { | extern "C" int omp_get_wtime (); | } | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return conftest::omp_get_wtime (); | ; | return 0; | } configure:9763: result: no configure:9772: checking for clock_gettime in -lrt configure:9802: g++ -o conftest -g -O2 conftest.cpp -lrt >&5 configure:9802: $? = 0 configure:9812: result: yes configure:9831: ++ add pthread : -lpthread ; in plugin/seq/WHERE_LIBRARY-config " configure:9858: checking wether we are on a MacIntosh configure:9870: result: no configure:9873: checking wether we are on SunOS configure:9880: result: no configure:9918: checking wether we are on Microsoft Windows configure:10142: result: no configure:10164: checking prefix dir freefem++ configure:10166: result: /home2/barretk3/lib/ff++/4.9 configure:10252: ----- CPU kind: x86_64 , intel/amd: yes configure:10879: checking whether to generate debugging information configure:11075: result: no configure:11090: checking whether the C compiler accepts -O3 configure:11126: gcc -std=gnu11 -o conftest -g -O2 -DNDEBUG -O3 conftest.c -lrt >&5 configure:11126: $? = 0 configure:11134: result: yes configure:11152: checking whether the C++ compiler accepts -O3 configure:11188: g++ -o conftest -g -O2 -DNDEBUG -O3 conftest.cpp -lrt >&5 configure:11188: $? = 0 configure:11196: result: yes configure:11214: checking whether the Fortran 77 compiler accepts -O3 configure:11234: gfortran -o conftest -g -O2 -DNDEBUG -O3 conftest.f -lrt >&5 configure:11234: $? = 0 configure:11242: result: yes configure:11912: checking whether the C compiler accepts -mmmx configure:11948: gcc -std=gnu11 -o conftest -g -DNDEBUG -O3 -mmmx conftest.c -lrt >&5 configure:11948: $? = 0 configure:11956: result: yes configure:11974: checking whether the C++ compiler accepts -mmmx configure:12010: g++ -o conftest -g -DNDEBUG -O3 -mmmx conftest.cpp -lrt >&5 configure:12010: $? = 0 configure:12018: result: yes configure:12036: checking whether the Fortran 77 compiler accepts -mmmx configure:12056: gfortran -o conftest -g -DNDEBUG -O3 -mmmx conftest.f -lrt >&5 configure:12056: $? = 0 configure:12064: result: yes configure:12085: checking whether the C compiler accepts -mavx configure:12121: gcc -std=gnu11 -o conftest -g -DNDEBUG -O3 -mmmx -mavx conftest.c -lrt >&5 configure:12121: $? = 0 configure:12129: result: yes configure:12147: checking whether the C++ compiler accepts -mavx configure:12183: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx conftest.cpp -lrt >&5 configure:12183: $? = 0 configure:12191: result: yes configure:12209: checking whether the Fortran 77 compiler accepts -mavx configure:12229: gfortran -o conftest -g -DNDEBUG -O3 -mmmx -mavx conftest.f -lrt >&5 configure:12229: $? = 0 configure:12237: result: yes configure:12961: CXXFLAGS = -g -DNDEBUG -O3 -mmmx -mavx configure:13093: checking whether the C++ compiler accepts -std=c++14 configure:13129: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++14 conftest.cpp -lrt >&5 g++: error: unrecognized command line option '-std=c++14' configure:13129: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | /* end confdefs.h. */ | | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | | ; | return 0; | } configure:13137: result: no configure:13172: checking whether the C++ compiler accepts -std=c++11 configure:13208: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 conftest.cpp -lrt >&5 configure:13208: $? = 0 configure:13216: result: yes configure:13243: ++ add cxx11 : -std=c++11 ; -std=c++11 in plugin/seq/WHERE_LIBRARY-config " configure:13304: checking suffix to add to package name configure:13309: result: none configure:13353: checking for stdio.h configure:13353: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:13353: $? = 0 configure:13353: result: yes configure:13353: checking for stdlib.h configure:13353: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:13353: $? = 0 configure:13353: result: yes configure:13353: checking for string.h configure:13353: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:13353: $? = 0 configure:13353: result: yes configure:13353: checking for inttypes.h configure:13353: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:13353: $? = 0 configure:13353: result: yes configure:13353: checking for stdint.h configure:13353: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:13353: $? = 0 configure:13353: result: yes configure:13353: checking for strings.h configure:13353: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:13353: $? = 0 configure:13353: result: yes configure:13353: checking for sys/stat.h configure:13353: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:13353: $? = 0 configure:13353: result: yes configure:13353: checking for sys/types.h configure:13353: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:13353: $? = 0 configure:13353: result: yes configure:13353: checking for unistd.h configure:13353: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:13353: $? = 0 configure:13353: result: yes configure:13353: checking for sys/time.h configure:13353: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:13353: $? = 0 configure:13353: result: yes configure:13380: checking for OpenGL/gl.h configure:13380: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 conftest.cpp:57:23: fatal error: OpenGL/gl.h: No such file or directory #include ^ compilation terminated. configure:13380: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:13380: result: no configure:13398: checking for GL/gl.h configure:13398: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:13398: $? = 0 configure:13398: result: yes configure:13413: checking for GLUT/glut.h configure:13413: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 conftest.cpp:58:23: fatal error: GLUT/glut.h: No such file or directory #include ^ compilation terminated. configure:13413: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:13413: result: no configure:13428: checking for GL/glut.h configure:13428: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:13428: $? = 0 configure:13428: result: yes configure:13472: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -framework GLUT -framework OpenGL -framework Cocoa >&5 g++: error: GLUT: No such file or directory g++: error: OpenGL: No such file or directory g++: error: Cocoa: No such file or directory g++: error: unrecognized command line option '-framework' g++: error: unrecognized command line option '-framework' g++: error: unrecognized command line option '-framework' configure:13472: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | /* end confdefs.h. */ | | namespace conftest { | extern "C" int glutInit (); | } | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return conftest::glutInit (); | ; | return 0; | } configure:13472: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -lglut -lGLU -lGL >&5 configure:13472: $? = 0 configure:13527: checking add suffix configure:13531: result: yes configure:13745: find real ( real ) petsc in /home2/barretk3/ff-petsc/r/lib/petsc/conf/petscvariables configure:13748: choose MPI from petsc : /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/bin/mpiexec configure:13837: checking for MPIRUN configure:13901: result: /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/bin/mpiexec configure:13904: checking for MPIRUN option: configure:13909: result: configure:13913: checking for mpipath configure:14083: result: configure:14200: eval /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/bin/mpicxx -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt >&5 configure:14200: $? = 0 configure:14208: result: yes configure:14218: checking MPI_DOUBLE_COMPLEX configure:14228: eval /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/bin/mpicxx -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:14228: $? = 0 configure:14235: result: yes configure:14429: ++ add mpifc : -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -lmpifort -lmpi -lrt -lpthread -Wl,-z,now -Wl,-z,relro -Wl,-z,noexecstack -ldl ; -I/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/include -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -Xlinker -rpath -Xlinker /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -Xlinker --enable-new-dtags in plugin/seq/WHERE_LIBRARY-config " configure:14443: ++ add mpif77 : -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -lmpifort -lmpi -lrt -lpthread -Wl,-z,now -Wl,-z,relro -Wl,-z,noexecstack -ldl ; -I/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/include -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -Xlinker -rpath -Xlinker /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -Xlinker --enable-new-dtags in plugin/seq/WHERE_LIBRARY-config " configure:14460: ++ add mpi : -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -lmpicxx -lmpifort -lmpi -lrt -lpthread -Wl,-z,now -Wl,-z,relro -Wl,-z,noexecstack -ldl ; -I/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/include -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -Xlinker -rpath -Xlinker /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -Xlinker --enable-new-dtags in plugin/seq/WHERE_LIBRARY-config " configure:14547: ++ add petsc : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lpetsc -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -Wl,-rpath,/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -Wl,-rpath,/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -Wl,-rpath,/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -Wl,-rpath,/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/openblas/0.2.18/lib -Wl,-rpath,/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -Wl,-rpath,/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -Wl,-rpath,/cm/shared/apps/hdf5/1.10.0/lib -L/cm/shared/apps/hdf5/1.10.0/lib -lHYPRE -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord -lscalapack -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -lsuperlu -lf2clapack -lf2cblas -lparmmg -lmmg -lmmg3d -lptesmumps -lptscotchparmetis -lptscotch -lptscotcherr -lesmumps -lscotch -lscotcherr -lparmetis -lmetis -ltet -lm -lstdc++ -ldl -lmpifort -lmpi -lrt -lpthread -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lrt -lquadmath -lstdc++ -ldl ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14572: ++ add parmetis : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lparmetis ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14597: ++ add metis : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lmetis ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14622: ++ add ptscotch : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lptesmumps -lptscotchparmetis -lptscotch -lptscotcherr -lesmumps -lscotch -lscotcherr ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14645: ++ add scotch : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lesmumps -lscotch -lscotcherr ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14668: ++ add mumps : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14693: ++ add tetgen : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -ltet ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14718: ++ add hpddm : ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14743: ++ add superlu : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lsuperlu ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14768: ++ add mmg : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lmmg -lmmg3d ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14793: ++ add parmmg : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lparmmg ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14818: ++ add scalapack : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lscalapack ; in plugin/seq/WHERE_LIBRARY-config " configure:14844: ++ add suitesparse : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lmetis ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14869: ++ add blaslapack : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lf2clapack -lf2cblas ; in plugin/seq/WHERE_LIBRARY-config " configure:14894: ++ add slepc : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lslepc ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:14911: ++ add arpack : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -larpack ; in plugin/seq/WHERE_LIBRARY-config " configure:14969: with petsc yes, with slepc yes configure:14996: find complex (complex) petsc in /home2/barretk3/ff-petsc/c/lib/petsc/conf/petscvariables configure:15795: ++ add petsccomplex : -Wl,-rpath,/home2/barretk3/ff-petsc/c/lib -L/home2/barretk3/ff-petsc/c/lib -lpetsc -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -Wl,-rpath,/home2/barretk3/ff-petsc/r -L/home2/barretk3/ff-petsc/r -Wl,-rpath,/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -Wl,-rpath,/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -Wl,-rpath,/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -Wl,-rpath,/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/openblas/0.2.18/lib -Wl,-rpath,/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -Wl,-rpath,/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -Wl,-rpath,/cm/shared/apps/hdf5/1.10.0/lib -L/cm/shared/apps/hdf5/1.10.0/lib -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord -lscalapack -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -lsuperlu -lopenblas -lparmmg -lmmg -lmmg3d -lptesmumps -lptscotchparmetis -lptscotch -lptscotcherr -lesmumps -lscotch -lscotcherr -lparmetis -lmetis -ltet -lm -lstdc++ -ldl -lmpifort -lmpi -lrt -lpthread -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ -ldl ; -I/home2/barretk3/ff-petsc/c/include -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:15823: -- do not add parmetis : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lparmetis -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:15848: -- do not add metis : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lmetis -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:15873: -- do not add ptscotch : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lptesmumps -lptscotchparmetis -lptscotch -lptscotcherr -lesmumps -lscotch -lscotcherr -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:15896: -- do not add scotch : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lesmumps -lscotch -lscotcherr -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:15919: -- do not add mumps : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:15944: -- do not add tetgen : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -ltet -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:15969: -- do not add hpddm : -I/home2/barretk3/ff-petsc/c/include in plugin/seq/WHERE_LIBRARY-config " configure:15994: -- do not add superlu : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lsuperlu -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:16019: -- do not add mmg : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lmmg -lmmg3d -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:16044: -- do not add parmmg : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lparmmg -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:16069: -- do not add scalapack : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lscalapack in plugin/seq/WHERE_LIBRARY-config " configure:16094: -- do not add suitesparse : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:16143: ++ add slepccomplex : -Wl,-rpath,/home2/barretk3/ff-petsc/c/lib -L/home2/barretk3/ff-petsc/c/lib -lslepc ; -I/home2/barretk3/ff-petsc/c/include -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:16218: with petsc complex yes, with slepc complex yes configure:17033: checking for wget configure:17054: found /usr/bin/wget configure:17066: result: yes configure:17140: checking for git configure:17161: found /usr/bin/git configure:17173: result: yes configure:17217: checking for arit_zero in -lcadnafree configure:17247: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -L/home2/barretk3/FreeFem-sources/3rdparty/cadna conftest.cpp -lcadnafree -lrt >&5 /usr/bin/ld: cannot find -lcadnafree collect2: error: ld returned 1 exit status configure:17247: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | /* end confdefs.h. */ | | namespace conftest { | extern "C" int arit_zero (); | } | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return conftest::arit_zero (); | ; | return 0; | } configure:17257: result: no configure:17267: checking for /home2/barretk3/FreeFem-sources/3rdparty/cadna/cadnafree.h configure:17267: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 conftest.cpp:61:70: fatal error: /home2/barretk3/FreeFem-sources/3rdparty/cadna/cadnafree.h: No such file or directory #include ^ compilation terminated. configure:17267: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:17267: result: no configure:17291: without cadna ***** configure:17314: checking for fftw_execute in -lfftw3 configure:17344: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lfftw3 -lrt >&5 /usr/bin/ld: cannot find -lfftw3 collect2: error: ld returned 1 exit status configure:17344: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | /* end confdefs.h. */ | | namespace conftest { | extern "C" int fftw_execute (); | } | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return conftest::fftw_execute (); | ; | return 0; | } configure:17354: result: no configure:17363: checking for fftw3.h configure:17363: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 conftest.cpp:61:19: fatal error: fftw3.h: No such file or directory #include ^ compilation terminated. configure:17363: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:17363: result: no configure:17439: ++ add lapack : ; in plugin/seq/WHERE_LIBRARY-config " configure:17453: ++ add blas : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lf2clapack -lf2cblas ; in plugin/seq/WHERE_LIBRARY-config " configure:17460: BLAS and LAPACK from petsc ***** configure:17998: checking for cblas.h configure:17998: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 conftest.cpp:61:19: fatal error: cblas.h: No such file or directory #include ^ compilation terminated. configure:17998: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:17998: result: no configure:18010: checking for Accelerate/cblas.h configure:18010: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 conftest.cpp:61:30: fatal error: Accelerate/cblas.h: No such file or directory #include ^ compilation terminated. configure:18010: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:18010: result: no configure:18022: checking for atlas/cblas.h configure:18022: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 conftest.cpp:61:25: fatal error: atlas/cblas.h: No such file or directory #include ^ compilation terminated. configure:18022: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:18022: result: no configure:18032: checking for cblas_zdotu_sub in -lcblas configure:18062: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lcblas -lrt >&5 /usr/bin/ld: cannot find -lcblas collect2: error: ld returned 1 exit status configure:18062: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | /* end confdefs.h. */ | | namespace conftest { | extern "C" int cblas_zdotu_sub (); | } | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return conftest::cblas_zdotu_sub (); | ; | return 0; | } configure:18072: result: no configure:18094: -- do not add blas : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lf2clapack -lf2cblas in plugin/seq/WHERE_LIBRARY-config " configure:18217: checking for lapack in -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath, -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lf2clapack -lf2cblas and -llapack configure:18242: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 /tmp/ccUdqJMZ.o: In function `main': /home2/barretk3/FreeFem-sources/conftest.cpp:48: undefined reference to `dgeqr2_' collect2: error: ld returned 1 exit status configure:18242: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | /* end confdefs.h. */ | | namespace conftest { | extern "C" int dgeqr2_ (); | } | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return conftest::dgeqr2_ (); | ; | return 0; | } configure:18273: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lf2clapack -lf2cblas >&5 configure:18273: $? = 0 configure:18326: result: yes configure:18565: -- do not add lapack : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lf2clapack -lf2cblas in plugin/seq/WHERE_LIBRARY-config " configure:18934: ++ add amd : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lmetis ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:18948: ++ add umfpack : -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lmetis ; -I/home2/barretk3/ff-petsc/r/include in plugin/seq/WHERE_LIBRARY-config " configure:19003: checking for times configure:19003: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19003: $? = 0 configure:19003: result: yes configure:19003: checking for sysconf configure:19003: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19003: $? = 0 configure:19003: result: yes configure:19025: checking for cstddef configure:19025: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:19025: $? = 0 configure:19025: result: yes configure:19032: checking for stddef.h configure:19032: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:19032: $? = 0 configure:19032: result: yes configure:19041: checking for semaphore.h configure:19041: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:19041: $? = 0 configure:19041: result: yes configure:19053: checking for sys/mman.h configure:19053: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:19053: $? = 0 configure:19053: result: yes configure:19074: checking for regex.h configure:19074: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:19074: $? = 0 configure:19074: result: yes configure:19087: checking for unistd.h configure:19087: result: yes configure:19108: checking for malloc.h configure:19108: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:19108: $? = 0 configure:19108: result: yes configure:19119: checking for asinh configure:19119: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19119: $? = 0 configure:19119: result: yes configure:19125: checking for acosh configure:19125: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19125: $? = 0 configure:19125: result: yes configure:19131: checking for atanh configure:19131: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19131: $? = 0 configure:19131: result: yes configure:19137: checking for getenv configure:19137: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19137: $? = 0 configure:19137: result: yes configure:19143: checking for jn configure:19143: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19143: $? = 0 configure:19143: result: yes configure:19149: checking for erfc configure:19149: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19149: $? = 0 configure:19149: result: yes configure:19155: checking for tgamma configure:19155: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19155: $? = 0 configure:19155: result: yes configure:19161: checking for gettimeofday configure:19161: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19161: $? = 0 configure:19161: result: yes configure:19167: checking for mallinfo configure:19167: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19167: $? = 0 configure:19167: result: yes configure:19173: checking for mstats configure:19173: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 /tmp/ccVBR8U8.o: In function `main': /home2/barretk3/FreeFem-sources/conftest.cpp:91: undefined reference to `mstats' collect2: error: ld returned 1 exit status configure:19173: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | /* end confdefs.h. */ | /* Define mstats to an innocuous variant, in case declares mstats. | For example, HP-UX 11i declares gettimeofday. */ | #define mstats innocuous_mstats | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char mstats (); below. */ | | #include | #undef mstats | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char mstats (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_mstats || defined __stub___mstats | choke me | #endif | | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return mstats (); | ; | return 0; | } configure:19173: result: no configure:19180: checking for srandomdev configure:19180: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 /tmp/ccciE5cF.o: In function `main': /home2/barretk3/FreeFem-sources/conftest.cpp:91: undefined reference to `srandomdev' collect2: error: ld returned 1 exit status configure:19180: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | /* end confdefs.h. */ | /* Define srandomdev to an innocuous variant, in case declares srandomdev. | For example, HP-UX 11i declares gettimeofday. */ | #define srandomdev innocuous_srandomdev | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char srandomdev (); below. */ | | #include | #undef srandomdev | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char srandomdev (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_srandomdev || defined __stub___srandomdev | choke me | #endif | | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return srandomdev (); | ; | return 0; | } configure:19180: result: no configure:19192: checking for second_ configure:19192: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 /tmp/ccB7o9NV.o: In function `main': /home2/barretk3/FreeFem-sources/conftest.cpp:91: undefined reference to `second_' collect2: error: ld returned 1 exit status configure:19192: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | /* end confdefs.h. */ | /* Define second_ to an innocuous variant, in case declares second_. | For example, HP-UX 11i declares gettimeofday. */ | #define second_ innocuous_second_ | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char second_ (); below. */ | | #include | #undef second_ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char second_ (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_second_ || defined __stub___second_ | choke me | #endif | | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return second_ (); | ; | return 0; | } configure:19192: result: no configure:19209: checking for libtool configure:19230: found /usr/bin/libtool configure:19242: result: yes configure:19338: checking for dlfcn.h configure:19344: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp >&5 configure:19344: $? = 0 configure:19351: result: yes configure:19356: checking for sin in -lm configure:19386: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19386: $? = 0 configure:19396: result: yes configure:19410: checking for dlinfo in -ldl configure:19440: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19440: $? = 0 configure:19450: result: yes configure:19462: checking whether dlopen links ok configure:19472: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19472: $? = 0 configure:19480: result: yes configure:19503: checking whether the C++ compiler accepts -rdynamic configure:19539: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19539: $? = 0 configure:19547: result: yes configure:19567: checking whether the C++ compiler accepts -fPIC configure:19603: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19603: $? = 0 configure:19611: result: yes configure:19629: checking whether the C compiler accepts -fPIC configure:19665: gcc -std=gnu11 -o conftest -g -DNDEBUG -O3 -mmmx -mavx -fPIC -rdynamic conftest.c -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19665: $? = 0 configure:19673: result: yes configure:19691: checking whether the C compiler accepts -fPIC configure:19727: gcc -std=gnu11 -o conftest -g -DNDEBUG -O3 -mmmx -mavx -fPIC -rdynamic conftest.c -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19727: $? = 0 configure:19735: result: yes configure:19757: checking whether the Fortran compiler accepts -fPIC configure:19778: gfortran -o conftest -g -O2 -rdynamic conftest.f -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19778: $? = 0 configure:19786: result: yes configure:19804: checking whether the Fortran compiler accepts -fPIC configure:19825: gfortran -o conftest -g -O2 -rdynamic conftest.f -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19825: $? = 0 configure:19833: result: yes configure:19851: checking whether the Fortran compiler accepts -fPIC configure:19872: gfortran -o conftest -g -O2 -fPIC -rdynamic conftest.f -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19872: $? = 0 configure:19880: result: yes configure:19898: checking whether the Fortran compiler accepts -fPIC configure:19919: gfortran -o conftest -g -O2 -fPIC -rdynamic conftest.f -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 configure:19919: $? = 0 configure:19927: result: yes configure:19956: checking whether the Fortran 77 compiler accepts -fallow-argument-mismatch configure:19976: gfortran -o conftest -g -DNDEBUG -O3 -mmmx -mavx -fPIC -fallow-argument-mismatch -rdynamic conftest.f -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 gfortran: error: unrecognized command line option '-fallow-argument-mismatch' configure:19976: $? = 1 configure: failed program was: | program x | end configure:19984: result: no configure:20002: checking whether the Fortran compiler accepts -fallow-argument-mismatch configure:20023: gfortran -o conftest -g -O2 -fPIC -fallow-argument-mismatch -rdynamic conftest.f -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath >&5 gfortran: error: unrecognized command line option '-fallow-argument-mismatch' configure:20023: $? = 1 configure: failed program was: | program main | | end configure:20031: result: no configure:20135: checking for gsl-config configure:20171: result: no configure:20180: checking for GSL - version >= 1.15 configure:20294: result: no configure:20445: checking check mumps_seq configure:20468: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -ldmumps_seq -lzmumps_seq -lmumps_common_seq -lpord_seq -lmpiseq_seq >&5 conftest.cpp:59:22: fatal error: dmumps_c.h: No such file or directory #include ^ compilation terminated. configure:20468: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | | ; | return 0; | } configure:20506: result: no configure:20512: checking check libseq configure:20535: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -lmpiseq_seq >&5 conftest.cpp:59:27: fatal error: mumps_seq/mpi.h: No such file or directory #include ^ compilation terminated. configure:20535: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | | ; | return 0; | } configure:20573: result: no configure:20579: checking check mumps_ptscotch configure:20602: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -lpord_ptscotch -lmumps_common_ptscotch -ldmumps_ptscotch -lzmumps_ptscotch -lpord_ptscotch >&5 conftest.cpp:59:22: fatal error: dmumps_c.h: No such file or directory #include ^ compilation terminated. configure:20602: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | | ; | return 0; | } configure:20640: result: no configure:20646: checking check mumps_scotch configure:20669: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -lpord_scotch -lmumps_common_scotch -ldmumps_scotch -lzmumps_scotch -lpord_scotch >&5 conftest.cpp:59:22: fatal error: dmumps_c.h: No such file or directory #include ^ compilation terminated. configure:20669: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | | ; | return 0; | } configure:20707: result: no configure:20713: checking check fftw3 configure:20736: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -lfftw3 >&5 conftest.cpp:59:19: fatal error: fftw3.h: No such file or directory #include ^ compilation terminated. configure:20736: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | | ; | return 0; | } configure:20774: result: no configure:20847: checking check blacs configure:20870: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -lblacsCinit -lblacsF77init -lblacs >&5 /usr/bin/ld: cannot find -lblacsCinit /usr/bin/ld: cannot find -lblacsF77init /usr/bin/ld: cannot find -lblacs collect2: error: ld returned 1 exit status configure:20870: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | | ; | return 0; | } configure:20908: result: no configure:21316: checking check freeyams configure:21339: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -lfreeyams >&5 conftest.cpp:59:25: fatal error: freeyamslib.h: No such file or directory #include ^ compilation terminated. configure:21339: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | | ; | return 0; | } configure:21377: result: no configure:21383: checking check mmg3d configure:21406: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -lmmg3d-v4 >&5 conftest.cpp:59:22: fatal error: libmmg3d.h: No such file or directory #include ^ compilation terminated. configure:21406: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | | ; | return 0; | } configure:21444: result: no configure:21584: checking check mshmet configure:21607: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -lmshmet >&5 conftest.cpp:59:23: fatal error: mshmetlib.h: No such file or directory #include ^ compilation terminated. configure:21607: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | | ; | return 0; | } configure:21645: result: no configure:21718: checking check ipopt configure:21741: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -lipopt >&5 conftest.cpp:59:27: fatal error: coin/IpTNLP.hpp: No such file or directory #include ^ compilation terminated. configure:21741: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | | ; | return 0; | } configure:21779: result: no configure:21785: checking check nlopt configure:21810: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -rdynamic conftest.cpp -ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -lnlopt >&5 conftest.cpp:59:21: fatal error: nlopt.hpp: No such file or directory #include ^ compilation terminated. configure:21810: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "FreeFEM" | #define PACKAGE_TARNAME "FreeFEM" | #define PACKAGE_VERSION "4.9" | #define PACKAGE_STRING "FreeFEM 4.9" | #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" | #define PACKAGE_URL "" | #define PACKAGE "FreeFEM" | #define VERSION "4.9" | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define YYTEXT_POINTER 1 | #define HAVE_LIBRT 1 | #define VersionFreeFem 4.9 | #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" | #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_TIME_H 1 | #define STDC_HEADERS 1 | #define HAVE_GL_GL_H 1 | #define HAVE_GL_GLUT_H 1 | #define PROG_FFGLUT "ffglut" | #define HAVE_MPI_DOUBLE_COMPLEX 1 | #define HAVE_LIBARPACK 1 | #define HAVE_LIBUMFPACK 1 | #define HAVE_LIBCHOLMOD 1 | #define HAVE_UMFPACK_H 1 | #define HAVE_TIMES 1 | #define HAVE_SYSCONF 1 | #define HAVE_CSTDDEF 1 | #define HAVE_STDDEF_H 1 | #define HAVE_SEMAPHORE_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_REGEX_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_MALLOC_H 1 | #define HAVE_ASINH 1 | #define HAVE_ACOSH 1 | #define HAVE_ATANH 1 | #define HAVE_GETENV 1 | #define HAVE_JN 1 | #define HAVE_ERFC 1 | #define HAVE_TGAMMA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_MALLINFO 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | | ; | return 0; | } configure:21848: result: no configure:24080: checking kernel version configure:24083: result: 3.10.0 configure:24088: checking libc version configure:24091: result: libc-2.17 configure:24139: checking for a sed that does not truncate output configure:24209: result: /usr/bin/sed configure:24214: checking for grep that handles long lines and -e configure:24278: result: /usr/bin/grep configure:24336: checking for h5cc configure:24359: found /cm/shared/apps/hdf5/1.10.0/bin/h5cc configure:24371: result: /cm/shared/apps/hdf5/1.10.0/bin/h5cc configure:24388: checking for HDF5 libraries configure:24442: result: yes (version 1.10.0-patch1) configure:24453: checking for hdf5.h configure:24453: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -I/cm/shared/apps/hdf5/1.10.0/include conftest.cpp >&5 configure:24453: $? = 0 configure:24453: result: yes configure:24461: checking for H5Fcreate in -lhdf5 configure:24491: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -I/cm/shared/apps/hdf5/1.10.0/include -L/cm/shared/apps/hdf5/1.10.0/lib conftest.cpp -lhdf5 -lm -ldl -lz -lhdf5 >&5 configure:24491: $? = 0 configure:24501: result: yes configure:24514: checking for main in -lhdf5_hl configure:24544: g++ -o conftest -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -I/cm/shared/apps/hdf5/1.10.0/include -L/cm/shared/apps/hdf5/1.10.0/lib conftest.cpp -lhdf5_hl -lm -ldl -lz -lhdf5 >&5 configure:24544: $? = 0 configure:24554: result: yes configure:24568: checking for matching HDF5 Fortran wrapper configure:24572: result: /cm/shared/apps/hdf5/1.10.0/bin/h5fc configure:24626: checking for H5Cpp.h configure:24626: g++ -c -g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC -I/cm/shared/apps/hdf5/1.10.0/include conftest.cpp >&5 configure:24626: $? = 0 configure:24626: result: yes configure:24643: ++ add hdf5 : -L/cm/shared/apps/hdf5/1.10.0/lib -lm -ldl -lz -lhdf5 -lhdf5_hl ; -I/cm/shared/apps/hdf5/1.10.0/include in plugin/seq/WHERE_LIBRARY-config " configure:25541: checking that generated files are newer than configure configure:25547: result: done configure:25758: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by FreeFEM config.status 4.9, which was generated by GNU Autoconf 2.71. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on vegaln1 config.status:1238: creating Makefile config.status:1238: creating 3rdparty/Makefile config.status:1238: creating 3rdparty/blas/Makefile config.status:1238: creating 3rdparty/arpack/Makefile config.status:1238: creating 3rdparty/umfpack/Makefile config.status:1238: creating 3rdparty/fftw/Makefile config.status:1238: creating src/Makefile config.status:1238: creating src/bamglib/Makefile config.status:1238: creating src/Graphics/Makefile config.status:1238: creating src/femlib/Makefile config.status:1238: creating src/Algo/Makefile config.status:1238: creating src/lglib/Makefile config.status:1238: creating src/ffgraphics/Makefile config.status:1238: creating src/ffgraphics/server/Makefile config.status:1238: creating src/ffgraphics/client/Makefile config.status:1238: creating src/fflib/Makefile config.status:1238: creating src/nw/Makefile config.status:1238: creating src/mpi/Makefile config.status:1238: creating src/bamg/Makefile config.status:1238: creating src/libMesh/Makefile config.status:1238: creating src/medit/Makefile config.status:1238: creating src/bin-win32/Makefile config.status:1238: creating plugin/Makefile config.status:1238: creating plugin/seq/Makefile config.status:1238: creating plugin/mpi/Makefile config.status:1238: creating examples/Makefile config.status:1238: creating examples/plugin/Makefile config.status:1238: creating examples/tutorial/Makefile config.status:1238: creating examples/misc/Makefile config.status:1238: creating examples/mpi/Makefile config.status:1238: creating examples/hpddm/Makefile config.status:1238: creating examples/ffddm/Makefile config.status:1238: creating examples/eigen/Makefile config.status:1238: creating examples/examples/Makefile config.status:1238: creating examples/bug/Makefile config.status:1238: creating examples/3d/Makefile config.status:1238: creating examples/3dSurf/Makefile config.status:1238: creating examples/3dCurve/Makefile config.status:1238: creating config.h config.status:1467: executing depfiles commands config.status:1544: cd src/lglib && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make: Nothing to be done for `am--depfiles'. config.status:1549: $? = 0 config.status:1544: cd src/fflib && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make: Nothing to be done for `am--depfiles'. config.status:1549: $? = 0 config.status:1544: cd src/nw && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make: Nothing to be done for `am--depfiles'. config.status:1549: $? = 0 config.status:1544: cd src/mpi && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make: Nothing to be done for `am--depfiles'. config.status:1549: $? = 0 config.status:1544: cd src/bamg && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make: Nothing to be done for `am--depfiles'. config.status:1549: $? = 0 config.status:1544: cd src/libMesh && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make: Nothing to be done for `am--depfiles'. config.status:1549: $? = 0 config.status:1544: cd src/medit && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make: Nothing to be done for `am--depfiles'. config.status:1549: $? = 0 config.status:1544: cd plugin/seq && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make: Nothing to be done for `am--depfiles'. config.status:1549: $? = 0 configure:27110: FreeFEM used download: yes configure:27112: -- Dynamic load facility: yes configure:27114: -- ARPACK (eigen value): yes configure:27116: -- UMFPACK (sparse solver): yes configure:27118: -- BLAS: yes configure:27120: -- with MPI: yes configure:27122: -- with PETSc: yes / PETSc complex: yes configure:27124: -- with SLEPc: yes / SLEPc complex: yes configure:27126: -- with hpddm: yes configure:27128: -- with htool: yes configure:27130: -- with bemtool: yes (need boost: yes and htool: yes) configure:27132: -- without libs: configure:27134: -- without plugins: configure:27138: progs: FreeFem++-nw bamg cvmsh2 FreeFem++-mpi ffmedit ffglut configure:27151: use of download fftw see 3rdparty/fftw/fftw-3.2/COPYRIGHT configure:27159: use of download freeyams see 3rdparty/yams/freeyams.2011.02.22 (suface mesh adaptation) configure:27163: use of download mmg3d (v4) see 3rdparty/mmg3d/mmg3d4/LICENCE.txt configure:27188: try to download: bem yams nlopt mumps_seq ipopt mshmet mmg3d configure:27193: use of download boost see 3rdparty/boost/LICENSE_1_0.txt configure:27211: Please run "3rdparty/getall" to download all necessary packages before running make ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_F77_set= ac_cv_env_F77_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set= ac_cv_env_FC_value= ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_MPICC_set= ac_cv_env_MPICC_value= ac_cv_env_MPICXX_set= ac_cv_env_MPICXX_value= ac_cv_env_MPIFC_set= ac_cv_env_MPIFC_value= ac_cv_env_MPIRUN_set=set ac_cv_env_MPIRUN_value=mpiexec ac_cv_env_YACC_set= ac_cv_env_YACC_value= ac_cv_env_YFLAGS_set= ac_cv_env_YFLAGS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=yes ac_cv_f77_dummy_main=none ac_cv_f77_libs=' -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath' ac_cv_f77_mangling='lower case, underscore, no extra underscore' ac_cv_fc_compiler_gnu=yes ac_cv_fortran_dummy_main=none ac_cv_func_acosh=yes ac_cv_func_asinh=yes ac_cv_func_atanh=yes ac_cv_func_erfc=yes ac_cv_func_getenv=yes ac_cv_func_gettimeofday=yes ac_cv_func_jn=yes ac_cv_func_mallinfo=yes ac_cv_func_mstats=no ac_cv_func_second_=no ac_cv_func_srandomdev=no ac_cv_func_sysconf=yes ac_cv_func_tgamma=yes ac_cv_func_times=yes ac_cv_hadf5_h=yes ac_cv_header_Accelerate_cblas_h=no ac_cv_header_GLUT_glut_h=no ac_cv_header_GL_gl_h=yes ac_cv_header_GL_glut_h=yes ac_cv_header_H5Cpp_h=yes ac_cv_header_OpenGL_gl_h=no ac_cv_header__home2_barretk3_FreeFem_sources_3rdparty_cadna_cadnafree_h=no ac_cv_header_atlas_cblas_h=no ac_cv_header_cblas_h=no ac_cv_header_cstddef=yes ac_cv_header_fftw3_h=no ac_cv_header_hdf5_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_malloc_h=yes ac_cv_header_regex_h=yes ac_cv_header_semaphore_h=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdio_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_mman_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_cadnafree_arit_zero=no ac_cv_lib_cblas_cblas_zdotu_sub=no ac_cv_lib_dl_dlinfo=yes ac_cv_lib_fftw3_fftw_execute=no ac_cv_lib_hdf5_H5Fcreate=yes ac_cv_lib_hdf5_hl=ac_cv_lib_hdf5_hl_main ac_cv_lib_hdf5_hl_main=yes ac_cv_lib_iomp5_omp_get_wtime=no ac_cv_lib_lex='none needed' ac_cv_lib_m_sin=yes ac_cv_lib_pthread_pthread_create=yes ac_cv_lib_rt_clock_gettime=yes ac_cv_libhdf5=yes ac_cv_objext=o ac_cv_path_GREP=/usr/bin/grep ac_cv_path_GSL_CONFIG=no ac_cv_path_H5CC=/cm/shared/apps/hdf5/1.10.0/bin/h5cc ac_cv_path_SED=/usr/bin/sed ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/usr/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_LEX=flex ac_cv_prog_YACC='bison -y' ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_ac_ct_CXX=g++ ac_cv_prog_ac_ct_F77=gfortran ac_cv_prog_ac_ct_FC=gfortran ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_cc_c11=-std=gnu11 ac_cv_prog_cc_g=yes ac_cv_prog_cc_stdc=-std=gnu11 ac_cv_prog_cxx_11=no ac_cv_prog_cxx_g=yes ac_cv_prog_cxx_stdcxx= ac_cv_prog_f77_g=yes ac_cv_prog_f77_v=-v ac_cv_prog_fc_g=yes ac_cv_prog_ff_bison=yes ac_cv_prog_ff_cmake=yes ac_cv_prog_ff_flex=yes ac_cv_prog_ff_git=yes ac_cv_prog_ff_libtool=yes ac_cv_prog_ff_m4=yes ac_cv_prog_ff_patch=yes ac_cv_prog_ff_unzip=yes ac_cv_prog_ff_wget=yes ac_cv_prog_lex_root=lex.yy ac_cv_prog_lex_yytext_pointer=yes ac_cv_prog_make_make_set=yes ac_cv_search_yywrap=no am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} '\''/home2/barretk3/FreeFem-sources/missing'\'' aclocal-1.16' ADD_PACKAGE_NAME='' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='ar' ARFLAGS='rv' ARPACKLIB='' ARPACKLIBS='-Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -larpack' ARPACK_FALSE='#' ARPACK_TRUE='' AUTOCONF='${SHELL} '\''/home2/barretk3/FreeFem-sources/missing'\'' autoconf' AUTOHEADER='${SHELL} '\''/home2/barretk3/FreeFem-sources/missing'\'' autoheader' AUTOMAKE='${SHELL} '\''/home2/barretk3/FreeFem-sources/missing'\'' automake-1.16' AWK='gawk' BAMGPROG='bamg cvmsh2' BEMTOOL_FALSE='#' BEMTOOL_TRUE='' BIN_ffmaster='ffmaster' BLACSLIBS=' -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lscalapack -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lf2clapack -lf2cblas' BLACS_FALSE='' BLACS_TRUE='#' BLASINC=' ' BLASLIBS='-Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lf2clapack -lf2cblas' BOOST_FALSE='#' BOOST_TRUE='' CC='gcc -std=gnu11' CCDEPMODE='depmode=gcc3' CFLAGS='-g -DNDEBUG -O3 -mmmx -mavx -fPIC' CFLAGSF77='-DAdd_ ' CNOFLAGS=' -fPIC' COMPILE_OPENBLAS='' CPPFLAGS='' CXX11FLAGS='-std=c++11' CXX='g++' CXXDEPMODE='depmode=gcc3' CXXFLAGS='-g -DNDEBUG -O3 -mmmx -mavx -std=c++11 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC' CYGPATH_W='echo' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DOWNLOADCOMPILE='compile-pkg install-other' DOWNLOADED_BLAS='' DOWNLOADED_BLAS_BUILT_SOURCES='' DOWNLOAD_ARPACK='' DOWNLOAD_FALSE='#' DOWNLOAD_FFTW='fftw' DOWNLOAD_TRUE='' DOWNLOAD_UMFPACK='' DYLIB_SUFFIX='so' ECHO_C='' ECHO_N='-n' ECHO_T='' EIGENOBJ='eigenvalue.$(OBJEXT)' ENABLE_EIGEN_FALSE='#' ENABLE_EIGEN_TRUE='' ENABLE_FFCS='no' ENABLE_FFCS_FALSE='' ENABLE_FFCS_TRUE='#' EXEEXT='' F77='gfortran' FC='gfortran' FCFLAGS='-g -O2 -fPIC' FFCS_MPIOK_FALSE='#' FFCS_MPIOK_TRUE='' FFCS_WINDOWS_FALSE='' FFCS_WINDOWS_TRUE='#' FFGLUTNAME='' FFGLUTPROG='ffglut' FFLAGS='-g -DNDEBUG -O3 -mmmx -mavx -fPIC' FFTW3_FALSE='#' FFTW3_TRUE='' FF_HAVE_REGEX_H='1' FF_LAPACKdir='' FF_LIBS='-ldl -lm -lrt -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath -L/cm/shared/apps/hdf5/1.10.0/lib -lm -ldl -lz -lhdf5 -lhdf5_hl' FF_MALLOC_H='1' FF_SECOND='second.o' FF_UMFPACK_CONFIG='' FF_conf_petsc_complex='/home2/barretk3/ff-petsc/c/lib/petsc/conf/petscvariables' FF_conf_petsc_real='/home2/barretk3/ff-petsc/r/lib/petsc/conf/petscvariables' FF_generic_petsc='' FF_prefix_petsc='/home2/barretk3/ff-petsc' FF_prefix_petsc_complex='/home2/barretk3/ff-petsc/c' FF_prefix_petsc_real='/home2/barretk3/ff-petsc/r' FLIBS=' -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath' FNOFLAGS=' -fPIC' FORTRAN_FALSE='#' FORTRAN_TRUE='' FREEYAMS_FALSE='#' FREEYAMS_TRUE='' G2CLIB=' -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/cm/shared/apps/lapack/gcc/64/3.7.0 -L/cm/shared/apps/openblas/0.2.18/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/libfabric/lib -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -L/cm/shared/apps/intel/itac/2019.5.075/intel64/slib -L/cm/shared/apps/hdf5/1.10.0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath' GCCNOCYGWIN='' GMM_FALSE='#' GMM_TRUE='' GREP='/usr/bin/grep' GSL_CFLAGS='' GSL_CONFIG='no' GSL_FALSE='' GSL_LIBS='' GSL_TRUE='#' H5CC='/cm/shared/apps/hdf5/1.10.0/bin/h5cc' H5FC='/cm/shared/apps/hdf5/1.10.0/bin/h5fc' HDF5_CC='gcc' HDF5_CFLAGS='' HDF5_CPPFLAGS='-I/cm/shared/apps/hdf5/1.10.0/include' HDF5_FALSE='#' HDF5_FC='' HDF5_FFLAGS='-I/cm/shared/apps/hdf5/1.10.0/lib -L/cm/shared/apps/hdf5/1.10.0/lib -I/cm/shared/apps/hdf5/1.10.0/include ' HDF5_FLIBS=' -lm -ldl -lz -lhdf5_fortran -lhdf5 -lhdf5hl_fortran -lhdf5_hl' HDF5_LDFLAGS='-L/cm/shared/apps/hdf5/1.10.0/lib ' HDF5_LIBS='-lm -ldl -lz -lhdf5 -lhdf5_hl' HDF5_TRUE='' HDF5_VERSION='1.10.0-patch1' HPDDM_FALSE='#' HPDDM_TRUE='' HTOOL_FALSE='#' HTOOL_TRUE='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' IPOPT_FALSE='#' IPOPT_TRUE='' KERNEL_VERSION='3.10.0' LAPACKLIBS='-Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lf2clapack -lf2cblas' LAPACK_arpack_LIB='' LDFLAGS=' -rdynamic' LEX='flex' LEXLIB='' LEX_OUTPUT_ROOT='lex.yy' LIBC_VERSION='libc-2.17' LIBOBJS='' LIBS='' LIBSEQ_FALSE='' LIBSEQ_TRUE='#' LIBSGLUT='-lglut -lGLU -lGL' LIBSNOCONSOLE='' LIBSPTHREAD='-lpthread' LIB_PTHREAD_GOOGLE='-lpthread' LOAD_COMPILE='load_compile' LOAD_TESTS='../regtests.sh' LTLIBOBJS='' MAINT='#' MAINTAINER_MODE_FALSE='' MAINTAINER_MODE_TRUE='#' MAKEINFO='${SHELL} '\''/home2/barretk3/FreeFem-sources/missing'\'' makeinfo' MEDITPROG='ffmedit' METIS_FALSE='#' METIS_TRUE='' MKDIR_P='/usr/bin/mkdir -p' MKL_FALSE='' MKL_TRUE='#' MMG3D_FALSE='#' MMG3D_TRUE='' MMG_FALSE='#' MMG_TRUE='' MPICC='/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/bin/mpicc' MPICXX='/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/bin/mpicxx' MPIFC='/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/bin/mpif90' MPIPROG='FreeFem++-mpi' MPIRUN='/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/bin/mpiexec' MPISCRIPT='ff-mpirun' MPI_FALSE='#' MPI_INCLUDE='-I/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/include -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -Xlinker -rpath -Xlinker /cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -Xlinker --enable-new-dtags ' MPI_INC_DIR='/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/include' MPI_LIB='-L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -lmpicxx -lmpifort -lmpi -lrt -lpthread -Wl,-z,now -Wl,-z,relro -Wl,-z,noexecstack -ldl ' MPI_LIBC='-L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -lmpifort -lmpi -lrt -lpthread -Wl,-z,now -Wl,-z,relro -Wl,-z,noexecstack -ldl ' MPI_LIBFC='-L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release -L/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib -lmpifort -lmpi -lrt -lpthread -Wl,-z,now -Wl,-z,relro -Wl,-z,noexecstack -ldl ' MPI_LIB_DIRS='/cm/shared/apps/intel/compilers_and_libraries/2019.5.075/mpi/intel64/lib/release' MPI_RUN_OPTION='' MPI_TRUE='' MSHMET_FALSE='#' MSHMET_TRUE='' MUMPS_FALSE='#' MUMPS_TRUE='' MUMPS_ptscotch_FALSE='' MUMPS_ptscotch_TRUE='#' MUMPS_scotch_FALSE='' MUMPS_scotch_TRUE='#' MUMPS_seq_FALSE='#' MUMPS_seq_TRUE='' NLOPT_FALSE='#' NLOPT_TRUE='' NO_RANGE_CHECK='' OBJEXT='o' OPTIM_TYPE='' PACKAGE='FreeFEM' PACKAGE_BUGREPORT='frederic.hecht@sorbonne-universite.fr' PACKAGE_NAME='FreeFEM' PACKAGE_STRING='FreeFEM 4.9' PACKAGE_TARNAME='FreeFEM' PACKAGE_URL='' PACKAGE_VERSION='4.9' PARMETIS_FALSE='#' PARMETIS_TRUE='' PARMMG_FALSE='#' PARMMG_TRUE='' PATH_SEPARATOR=':' PETSCCOMPLEX_FALSE='#' PETSCCOMPLEX_TRUE='' PETSC_FALSE='#' PETSC_TRUE='' PIPE_FALSE='#' PIPE_TRUE='' PTHREAD_FALSE='#' PTHREAD_TRUE='' PTSCOTCH_FALSE='#' PTSCOTCH_TRUE='' RANLIB='ranlib' RANLIN='ranlib' SCALAPACK_FALSE='#' SCALAPACK_TRUE='' SCOTCH_FALSE='#' SCOTCH_INCLUDE='/home2/barretk3/FreeFem-sources/3rdparty/include/scotch' SCOTCH_TRUE='' SED='/usr/bin/sed' SET_MAKE='' SHELL='/bin/sh' SIZEOF_INT='4' SIZEOF_LONG='8' SIZEOF_PTR='8' SIZEOF_PTRINBIT='64' SKIP_TESTS_EIGEN='' SKIP_TESTS_MPI='no' SLEPCCOMPLEX_FALSE='#' SLEPCCOMPLEX_TRUE='' SLEPC_FALSE='#' SLEPC_TRUE='' STATICTOOL='' STDPROG='' STD_GRAPH_OBJ='' STD_LDFLAGS='' STD_LIBS='' STRIP='' SUPERLU_FALSE='#' SUPERLU_TRUE='' TEST_FFPP='../../src/nw/FreeFem++' TEST_FFPPMPI='../../src/mpi/ff-mpirun' TEST_FFPP_MPI='../../src/mpi/FreeFem++-mpi' TETGEN_FALSE='#' TETGEN_TRUE='' TOOL_COMPILE_MMAP='MMAP' TOOL_COMPILE_NewSolver='NewSolver' TOOL_COMPILE_bem='bem' TOOL_COMPILE_blaslapack='' TOOL_COMPILE_gmm='gmm' TOOL_COMPILE_gsl='' TOOL_COMPILE_hpddm='' TOOL_COMPILE_iohdf5='iohdf5' TOOL_COMPILE_ipopt='ipopt' TOOL_COMPILE_lapack='' TOOL_COMPILE_libpthread_google='' TOOL_COMPILE_metis='' TOOL_COMPILE_mkl='mkl' TOOL_COMPILE_mmg3d='mmg3d' TOOL_COMPILE_mmg='' TOOL_COMPILE_mshmet='mshmet' TOOL_COMPILE_mumps='' TOOL_COMPILE_mumps_seq='mumps-seq' TOOL_COMPILE_nlopt='nlopt' TOOL_COMPILE_parmetis='' TOOL_COMPILE_parmmg='' TOOL_COMPILE_petsc='' TOOL_COMPILE_petsccomplex='' TOOL_COMPILE_pipe='pipe' TOOL_COMPILE_ptscotch='' TOOL_COMPILE_scalapack='' TOOL_COMPILE_scotch='' TOOL_COMPILE_suitesparse='' TOOL_COMPILE_superlu='' TOOL_COMPILE_tetgen='' TOOL_COMPILE_umfpack='' TOOL_COMPILE_yams='yams' TOOL_DYLIB_MMAP='ff-mmap-semaphore.so' TOOL_DYLIB_NewSolver='NewSolver.so' TOOL_DYLIB_bem='bem.so' TOOL_DYLIB_ffnewuoa='ffnewuoa.so' TOOL_DYLIB_gmm='ilut.so' TOOL_DYLIB_gsl='' TOOL_DYLIB_hpddm='hpddm.so hpddm_substructuring.so PETSc.so function-PETSc.so PETSc-complex.so SLEPc-complex.so SLEPc.so' TOOL_DYLIB_iohdf5='iohdf5.so' TOOL_DYLIB_ipopt='ff-Ipopt.so' TOOL_DYLIB_lapack='lapack.so' TOOL_DYLIB_libpthread_google='' TOOL_DYLIB_metis='metis.so' TOOL_DYLIB_mkl='PARDISO.so' TOOL_DYLIB_mmg3d='mmg3d-v4.0.so' TOOL_DYLIB_mmg='mmg.so' TOOL_DYLIB_mshmet='mshmet.so aniso.so' TOOL_DYLIB_mumps='MUMPS.so MUMPS_mpi.so' TOOL_DYLIB_mumps_seq='MUMPS_seq.so MUMPS.so' TOOL_DYLIB_nlopt='ff-NLopt.so' TOOL_DYLIB_parmetis='parmetis.so' TOOL_DYLIB_parmmg='parmmg.so' TOOL_DYLIB_pipe='pipe.so' TOOL_DYLIB_scalapack='MUMPS.so MUMPS_mpi.so' TOOL_DYLIB_scotch='scotch.so' TOOL_DYLIB_superlu='SuperLu.so' TOOL_DYLIB_tetgen='tetgen.so' TOOL_DYLIB_umfpack='UMFPACK64.so' TOOL_DYLIB_yams='freeyams.so' UMFPACKLIBS=' -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -Wl,-rpath,/home2/barretk3/ff-petsc/r/lib -L/home2/barretk3/ff-petsc/r/lib -lmetis' UMFPACK_CPPFLAGS=' -I/home2/barretk3/ff-petsc/r/include' UMFPACK_FALSE='#' UMFPACK_TRUE='' VERSION='4.9' WGET='wget --no-check-certificate' WIN32DLLTARGET='' WINDRESOBJ='' WITH_CXX11='yes' YACC='bison -y' YFLAGS='' ac_ct_CC='gcc' ac_ct_CXX='g++' ac_ct_F77='gfortran' ac_ct_FC='gfortran' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' ff_bison='yes' ff_cmake='yes' ff_curl='' ff_flex='yes' ff_git='yes' ff_libtool='yes' ff_m4='yes' ff_patch='yes' ff_prefix_dir='/home2/barretk3/lib/ff++/4.9' ff_prefix_dir_etc='/home2/barretk3/lib/ff++/4.9/etc' ff_prefix_dir_example='${datarootdir}/FreeFEM/4.9' ff_prefix_dir_include='/home2/barretk3/lib/ff++/4.9/include' ff_prefix_dir_lib='/home2/barretk3/lib/ff++/4.9/lib' ff_prefix_dir_lib_mpi='/home2/barretk3/lib/ff++/4.9/lib/mpi' ff_unzip='yes' ff_wget='yes' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /home2/barretk3/FreeFem-sources/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/home2/barretk3' program_transform_name='s,x,x,' psdir='${docdir}' runstatedir='${localstatedir}/run' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "FreeFEM" #define PACKAGE_TARNAME "FreeFEM" #define PACKAGE_VERSION "4.9" #define PACKAGE_STRING "FreeFEM 4.9" #define PACKAGE_BUGREPORT "frederic.hecht@sorbonne-universite.fr" #define PACKAGE_URL "" #define PACKAGE "FreeFEM" #define VERSION "4.9" #define F77_FUNC(name,NAME) name ## _ #define F77_FUNC_(name,NAME) name ## _ #define YYTEXT_POINTER 1 #define HAVE_LIBRT 1 #define VersionFreeFem 4.9 #define VersionFreeFemDate "Mon Apr 26 16:18:56 EDT 2021" #define FF_PREFIX_DIR "/home2/barretk3/lib/ff++/4.9" #define HAVE_STDIO_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_STRINGS_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SYS_TIME_H 1 #define STDC_HEADERS 1 #define HAVE_GL_GL_H 1 #define HAVE_GL_GLUT_H 1 #define PROG_FFGLUT "ffglut" #define HAVE_MPI_DOUBLE_COMPLEX 1 #define HAVE_LIBARPACK 1 #define HAVE_LIBUMFPACK 1 #define HAVE_LIBCHOLMOD 1 #define HAVE_UMFPACK_H 1 #define HAVE_TIMES 1 #define HAVE_SYSCONF 1 #define HAVE_CSTDDEF 1 #define HAVE_STDDEF_H 1 #define HAVE_SEMAPHORE_H 1 #define HAVE_SYS_MMAN_H 1 #define HAVE_REGEX_H 1 #define HAVE_UNISTD_H 1 #define TIME_WITH_SYS_TIME 1 #define HAVE_MALLOC_H 1 #define HAVE_ASINH 1 #define HAVE_ACOSH 1 #define HAVE_ATANH 1 #define HAVE_GETENV 1 #define HAVE_JN 1 #define HAVE_ERFC 1 #define HAVE_TGAMMA 1 #define HAVE_GETTIMEOFDAY 1 #define HAVE_MALLINFO 1 #define HAVE_LIBM 1 #define HAVE_LIBDL 1 #define HAVE_DLFCN_H 1 #define HAVE_HDF5 1 configure: exit 0